Figures and data
![](https://prod--epp.elifesciences.org/iiif/2/103503%2Fv1%2F2407.21115%2F2407.21115v1_fig1.tif/full/max/0/default.jpg)
Methodology used to observe effects of fluid flow on Microcystis colonies.
(A) Experimental setup consisting of a (cone- and-plate) controlled flow setup combined with inverted microscopy. The conical upper surface was rotated by a rheometer head, while the stationary glass slide below the sample allowed optical access for the microscope. (B) Examples of microscopy images. Colony size distributions were calculated after image processing of the captured frames. (C) Changes in size distributions (and other complementary measurements) over time were used to identify aggregation and fragmentation of cyanobacterial colonies. (D) The majority of the measurements were conducted using a laboratory culture of Microcystis strain V163. Colonies collected from Lake Gaasperplas (Netherlands), dominated by the morphospecies M. aeruginosa were also used.
![](https://prod--epp.elifesciences.org/iiif/2/103503%2Fv1%2F2407.21115%2F2407.21115v1_fig2.tif/full/max/0/default.jpg)
Kinetics of fragmentation of Microcystis strain V163 colonies under cone-and-plate shear flow. The laboratory culture was filtered to select mainly large colonies, and the total biovolume fraction was adjusted to ϕ = 10−4. Suspensions were subjected to an intense dissipation rate (
![](https://prod--epp.elifesciences.org/iiif/2/103503%2Fv1%2F2407.21115%2F2407.21115v1_fig3.tif/full/max/0/default.jpg)
Kinetics of aggregation for a single-cell suspension of Microcystis strain V163 at a moderate dissipation rate of
![](https://prod--epp.elifesciences.org/iiif/2/103503%2Fv1%2F2407.21115%2F2407.21115v1_fig4.tif/full/max/0/default.jpg)
Kinetics of the fragmentation of colonies in field samples of Microcystis spp. at an intense dissipation rate (
![](https://prod--epp.elifesciences.org/iiif/2/103503%2Fv1%2F2407.21115%2F2407.21115v1_fig5.tif/full/max/0/default.jpg)
Phase diagram indicating the dominant colony formation mechanism as a function of the dissipation rate
![](https://prod--epp.elifesciences.org/iiif/2/103503%2Fv1%2F2407.21115%2F2407.21115v1_fig6.tif/full/max/0/default.jpg)
(A-D) Micrographic images of phytoplankton field samples collected from the surface layer of Lake Gaasperplas. Microcystis spp. are dominant in the sample.
![](https://prod--epp.elifesciences.org/iiif/2/103503%2Fv1%2F2407.21115%2F2407.21115v1_fig7.tif/full/max/0/default.jpg)
Kinetics of the fragmentation of Microcystis strain V163 colonies under a moderate dissipation rate (
![](https://prod--epp.elifesciences.org/iiif/2/103503%2Fv1%2F2407.21115%2F2407.21115v1_fig8.tif/full/max/0/default.jpg)
Kinetics of the fragmentation of strain V163 colonies under a moderate total biovolume fraction (ϕ = 10-4) and various values of dissipation rate. The laboratory culture was filtered to select mainly large colonies, and total biovolume fraction was adjusted. Plots in the left column depict the median diameter of each size population as a function of time, where bars and shaded regions indicate limits of 25th and 75th percentiles. Plots in the right column depict the fraction of small colonies as a function of time. The dissipation rate is (A-B)
![](https://prod--epp.elifesciences.org/iiif/2/103503%2Fv1%2F2407.21115%2F2407.21115v1_fig9.tif/full/max/0/default.jpg)
Kinetics of the aggregation of Microcystis strain V163 colonies under a moderate dissipation rate (
![](https://prod--epp.elifesciences.org/iiif/2/103503%2Fv1%2F2407.21115%2F2407.21115v1_fig10.tif/full/max/0/default.jpg)
Rheology of concentrated colonies of Microcystis strain V163. (A) Shear stress as a function of the shear rate obtained for a steady shear test. Solid line indicates a Herschel–Bulkley fit,
![](https://prod--epp.elifesciences.org/iiif/2/103503%2Fv1%2F2407.21115%2F2407.21115v1_fig11.tif/full/max/0/default.jpg)
Comparison of hypothesis for the fragment distribution of category C1 colonies. Bars show the experimental results for normalized biovolume distribution of filtered single cells of Microcystis strain V163 after 1 hour under a moderate dissipation rate (
![](https://prod--epp.elifesciences.org/iiif/2/103503%2Fv1%2F2407.21115%2F2407.21115v1_fig12.tif/full/max/0/default.jpg)
Cone-and-plate setup used to generate a turbulent shear in a suspension of Microcystis colonies. (A) Schematics of the components with the main dimensions indicated in millimeters. (B) Average energy dissipation rate as a function of the angular velocity of the conical probe. Bullets indicate the measured data, and the solid lines indicate the best fit of the laminar regime (~ ω2) and the inertial regime (~ ω5/2).