1. Epidemiology and Global Health
  2. Microbiology and Infectious Disease

Effectiveness of rapid SARS-CoV-2 genome sequencing in supporting infection control for hospital-onset COVID-19 infection: multicenter, prospective study

  1. Oliver Stirrup
  2. James Blackstone
  3. Fiona Mapp
  4. Alyson MacNeil
  5. Monica Panca
  6. Alison Holmes
  7. Nicholas Machin
  8. Gee Yen Shin
  9. Tabitha Mahungu
  10. Kordo Saeed
  11. Tranprit Saluja
  12. Yusri Taha
  13. Nikunj Mahida
  14. Cassie Pope
  15. Anu Chawla
  16. Maria-Teresa Cutino-Moguel
  17. Asif Tamuri
  18. Rachel Williams
  19. Alistair Darby
  20. David L Robertson
  21. Flavia Flaviani
  22. Eleni Nastouli
  23. Samuel Robson
  24. Darren Smith
  25. Kenneth Laing
  26. Irene Monahan
  27. Beatrix Kele
  28. Sam Haldenby
  29. Ryan George
  30. Matthew Bashton
  31. Adam A Witney
  32. Matthew Byott
  33. Francesc Coll
  34. Michael Chapman
  35. Sharon J Peacock
  36. COG‐UK HOCI Investigators
  37. The COVID‐19 Genomics UK (COG‐UK) Consortium
  38. Joseph Hughes
  39. Gaia Nebbia
  40. David G Partridge
  41. Matthew Parker
  42. James Richard Price
  43. Christine Peters
  44. Sunando Roy
  45. Luke B Snell
  46. Thushan I de Silva
  47. Emma Thomson
  48. Paul Flowers
  49. Andrew Copas
  50. Judith Breuer  Is a corresponding author
  1. University College London, United Kingdom
  2. Imperial College Healthcare NHS Trust, United Kingdom
  3. Manchester University NHS Foundation Trust, United Kingdom
  4. University College London Hospitals NHS Foundation Trust, United Kingdom
  5. Royal Free London NHS Foundation Trust, United Kingdom
  6. University Hospital Southampton NHS Foundation Trust, United Kingdom
  7. Sandwell & West Birmingham Hospitals NHS Trust, United Kingdom
  8. Newcastle-upon-Tyne Hospitals NHS Foundation Trust, United Kingdom
  9. Nottingham University Hospitals NHS Trust, United Kingdom
  10. St George's University Hospitals NHS Foundation Trust, United Kingdom
  11. Liverpool University Hospitals NHS Foundation Trust, United Kingdom
  12. Barts Health NHS Trust, United Kingdom
  13. University of Liverpool, United Kingdom
  14. University of Glasgow, United Kingdom
  15. Guy's and St Thomas' Hospital NHS Foundation Trust, United Kingdom
  16. University of Portsmouth, United Kingdom
  17. Northumbria University, United Kingdom
  18. St George's, University of London, United Kingdom
  19. London School of Hygiene & Tropical Medicine, United Kingdom
  20. Health Data Research UK, United Kingdom
  21. University of Cambridge, United Kingdom
  22. Guy's and St Thomas' NHS Foundation Trust, United Kingdom
  23. Sheffield Teaching Hospitals NHS Foundation Trust, United Kingdom
  24. University of Sheffield, United Kingdom
  25. NHS Greater Glasgow and Clyde, United Kingdom
  26. University of Strathclyde, United Kingdom
https://doi.org/10.7554/eLife.78427
Share this article
Cite this article
  1. Oliver Stirrup
  2. James Blackstone
  3. Fiona Mapp
  4. Alyson MacNeil
  5. Monica Panca
  6. Alison Holmes
  7. Nicholas Machin
  8. Gee Yen Shin
  9. Tabitha Mahungu
  10. Kordo Saeed
  11. Tranprit Saluja
  12. Yusri Taha
  13. Nikunj Mahida
  14. Cassie Pope
  15. Anu Chawla
  16. Maria-Teresa Cutino-Moguel
  17. Asif Tamuri
  18. Rachel Williams
  19. Alistair Darby
  20. David L Robertson
  21. Flavia Flaviani
  22. Eleni Nastouli
  23. Samuel Robson
  24. Darren Smith
  25. Kenneth Laing
  26. Irene Monahan
  27. Beatrix Kele
  28. Sam Haldenby
  29. Ryan George
  30. Matthew Bashton
  31. Adam A Witney
  32. Matthew Byott
  33. Francesc Coll
  34. Michael Chapman
  35. Sharon J Peacock
  36. COG‐UK HOCI Investigators
  37. The COVID‐19 Genomics UK (COG‐UK) Consortium
  38. Joseph Hughes
  39. Gaia Nebbia
  40. David G Partridge
  41. Matthew Parker
  42. James Richard Price
  43. Christine Peters
  44. Sunando Roy
  45. Luke B Snell
  46. Thushan I de Silva
  47. Emma Thomson
  48. Paul Flowers
  49. Andrew Copas
  50. Judith Breuer
(2022)
Effectiveness of rapid SARS-CoV-2 genome sequencing in supporting infection control for hospital-onset COVID-19 infection: multicenter, prospective study
eLife 11:e78427.
https://doi.org/10.7554/eLife.78427
  2. Download BibTeX
  3. Download .RIS
1 additional file

Additional files

All additional files

Any figure supplements, source code, source data, videos or supplementary files associated with this article are contained within this zip.

https://cdn.elifesciences.org/articles/78427/elife-78427-supp-v1.zip

Download links

A two-part list of links to download the article, or parts of the article, in various formats.

Downloads (link to download the article as PDF)

Open citations (links to open the citations from this article in various online reference manager services)

Cite this article (links to download the citations from this article in formats compatible with various reference manager tools)

  1. Oliver Stirrup
  2. James Blackstone
  3. Fiona Mapp
  4. Alyson MacNeil
  5. Monica Panca
  6. Alison Holmes
  7. Nicholas Machin
  8. Gee Yen Shin
  9. Tabitha Mahungu
  10. Kordo Saeed
  11. Tranprit Saluja
  12. Yusri Taha
  13. Nikunj Mahida
  14. Cassie Pope
  15. Anu Chawla
  16. Maria-Teresa Cutino-Moguel
  17. Asif Tamuri
  18. Rachel Williams
  19. Alistair Darby
  20. David L Robertson
  21. Flavia Flaviani
  22. Eleni Nastouli
  23. Samuel Robson
  24. Darren Smith
  25. Kenneth Laing
  26. Irene Monahan
  27. Beatrix Kele
  28. Sam Haldenby
  29. Ryan George
  30. Matthew Bashton
  31. Adam A Witney
  32. Matthew Byott
  33. Francesc Coll
  34. Michael Chapman
  35. Sharon J Peacock
  36. COG‐UK HOCI Investigators
  37. The COVID‐19 Genomics UK (COG‐UK) Consortium
  38. Joseph Hughes
  39. Gaia Nebbia
  40. David G Partridge
  41. Matthew Parker
  42. James Richard Price
  43. Christine Peters
  44. Sunando Roy
  45. Luke B Snell
  46. Thushan I de Silva
  47. Emma Thomson
  48. Paul Flowers
  49. Andrew Copas
  50. Judith Breuer
(2022)
Effectiveness of rapid SARS-CoV-2 genome sequencing in supporting infection control for hospital-onset COVID-19 infection: multicenter, prospective study
eLife 11:e78427.
https://doi.org/10.7554/eLife.78427